Recent Publications

CMSE Publications

July 20, 2017
A Petrov–Galerkin Spectral Element Method for Fractional Elliptic Problems
A Petrov–Galerkin Spectral Element Method for Fractional Elliptic Problems

CMSE Professor Mohsen Zayernouri, the director of FMATH group, is publishing a new paper in Computer Methods in Applied Mechanics and Engineering on September 1, 2017.

Link: http://www.sciencedirect.com/science/article/pii/S0045782516312725

June 15, 2017
Petrov-Galerkin and Spectral Collocation Methods for Distributed Order Differential Equations
Petrov-Galerkin and Spectral Collocation Methods for Distributed Order Differential Equations

CMSE Professor Mohsen Zayernouri, the director of FMATH group, is publishing a new paper in SIAM Journal of Scientific Computing on 25 May 2017

Link: https://doi.org/10.1137/16M1073121 

June 15, 2017
Time Coupled Diffusion Maps
Time Coupled Diffusion Maps

Cornell Universiry Library published a paper by faculty member Matthew J. Hirn on 15 August, 2016.

Link: https://arxiv.org/abs/1608.03628

June 8, 2017
A Generalized Ewald Decomposition for Screened Coulomb Interactions
A Generalized Ewald Decomposition for Screened Coulomb Interactions

CMSE researchers Gautham Dharuman & Michael Murillo have a new paper published by The Journal of Chemical Physics for their work involving Ewald method and medium-range interactions for charged-particle systems.

Link: http://dx.doi.org/10.1063/1.4973842

June 8, 2017
(Quasi)Periodicity Quantification in Video Data, Using Topology
(Quasi)Periodicity Quantification in Video Data, Using Topology

CMSE Faculty Jose Perea's paper was published by The Cornell University Library for his work in Topology submitted on 26 April 2017.

Link: https://arxiv.org/abs/1704.08382

June 8, 2017
Wavelet Scattering Regression of Quantum Chemical Energies
Wavelet Scattering Regression of Quantum Chemical Energies

Multiscale Modeling and Simulation has published the following paper by Matthew Hirn, Stephane Mallat, & Nicolas Poilvert for their work in Wavelet Scattering on 2 May 2017.

Link: http://epubs.siam.org/doi/abs/10.1137/16M1075454

June 7, 2017
A Petrov-Galerkin Spectral Method of Linear Complexity for Fractional Multi-Term ODEs on the Half Line
A Petrov-Galerkin Spectral Method of Linear Complexity for Fractional Multi-Term ODEs on the Half Line

CMSE Professor Mohsen Zayernouri, the director of FMATH group, published a new paper in SIAM Journal of Scientific Computing (SIAM J. Sci. Comput., 39(3), A922–A946) on 25 May 2017. 

Link: http://epubs.siam.org/doi/abs/10.1137/17M1113060

June 7, 2017
Multiple Ligand Unbinding Pathways and Ligand-Induced Destabilization Revealed by WExplore
Multiple Ligand Unbinding Pathways and Ligand-Induced Destabilization Revealed by WExplore

The Biophysical Journal had published a paper by Alex Dickson & Samual D. Lotz, published on 28 February 2017 for their work on Ligand Pathways.

Link: http://www.sciencedirect.com/science/article/pii/S0006349517300450

June 7, 2017
Kinetics of Ligand Binding Through Advanced Computational Approaches: A Review
Kinetics of Ligand Binding Through Advanced Computational Approaches: A Review

Current Topics in Medicinal Chemistry featured a new paper by Alex Dickson, Pratyush Tiwary, & Harish Vashisth on 14 April 2017 for their work in Kinetics of Ligand Binding.

Link: https://www.ncbi.nlm.nih.gov/pubmed/28413946

June 7, 2017
Optimal Allosteric Stabilization Sites using Contact Stabilization Analysis
Optimal Allosteric Stabilization Sites using Contact Stabilization Analysis

The Journal of Computational Chemistry featured a new paper by Alex Dickson, Christopher T. Bailey, & John Karanicolas, on 5 June 2017.

Link: http://onlinelibrary.wiley.com/doi/10.1002/jcc.24517/full

May 4, 2017
A Review of Applications of Fractional Calculus in Earth System Dynamics
A Review of Applications of Fractional Calculus in Earth System Dynamics

CMSE Professor Mohsen Zayernouri, the director of FMATH group, has published a new paper in The Journal of Chaos, Solitons, & Fractals (2017).

Link: https://doi.org/10.1016/j.chaos.2017.03.051

May 2, 2017
Rapidly computing sparse Legendre expansions via sparse Fourier transforms
Rapidly Computing Sparse Legendre Expansions via Sparse Fourier Transforms

Xianfeng Hu, Mark Iwen, & Hyejin Kim authored a new paper for their work in Rapid Computing published by Numer. Algor. (2017) 74: 1029.
DOI: 10.1007/s11075-016-0184-x

Link: http://users.math.msu.edu/users/markiwen/Papers/Legendre_SUBMITTED.pdf

April 12, 2017
Computing Minimal Interpolants in C^1,1(R^d)
Computing Minimal Interpolants in C^1,1(R^d)

Ariel Herbert-Voss, Matthew J. Hirn, & Frederick McCollum published a paper in Revista Mathematica Iberoamericana for their work on Computing Minimal Interpolants.

Link: http://www.ems-ph.org/journals/show_abstract.php?issn=0213-2230&vol=33&iss=1&rank=2

March 27, 2017
CMSE faculty Michael Murillo's paper was published by the American Physical Society's Physical Review Letters.
CMSE faculty Michael Murillo's paper was published by the American Physical Society's Physical Review Letters.

M. S. Murillo & M. Marciante published a new paper on Thermodynamic and Kinetic Properties in Phys. Rev. Lett. 118, 025001 – 10 January 2017
Link: https://doi.org/10.1103/PhysRevLett.118.025001
 

March 22, 2017
CMSE faculty, M. Zayernouri, paper recognized as one the top 10 most cited JCP papers of 2014
CMSE faculty, M. Zayernouri, paper recognized as one the top 10 most cited JCP papers of 2014

M. Zayernouri & G.E. Karniadakis published a new paper in The Journal of Computational Physics, vol. 257, Part A, pp. 460–480, Jan. 2014.
DOI: 10.1016/j.jcp.2013.09.039
Link: http://www.sciencedirect.com/science/article/pii/S0021999113006530

June 22, 2016
Fractional-order uniaxial visco-elasto-plastic models for structural analysis
Fractional-order uniaxial visco-elasto-plastic models for structural analysis

CMSE Professor Mohsen Zayernouri, the director of FMATH group, has published a new paper in Computer Methods in Applied Mechanics and Engineering.

Link: doi:10.1016/j.cma.2016.05.030

May 30, 2016
Ligand Release Pathways Obtained with WExplore: Residence Times and Mechanisms
Ligand Release Pathways Obtained with WExplore: Residence Times and Mechanisms

Alex Dickson & Samuel D Lotz published a new paper for their work in Ligand Pathways on 26 May 2016. in J. Phys. Chem. B

DOI: 10.1021/acs.jpcb.6b04012

Link: http://pubs.acs.org/doi/abs/10.1021/acs.jpcb.6b04012